INNER CODE UNIT · Python

node_size

torognes/swarm · scripts/graph_plot.py:175

        node_size = 30 + (abundance * 70 / maximum)
        node_sizes.append(node_size)
        # Label nodes with an abundance greater than 10
        if abundance >= 10 or abundance == maximum:
            node_labels.append(str(abundance))
        else:
            node_labels.append("")  # Doesn't work with "None"

    g.vs["name"] = amplicon_ids
    g.vs["abundance"] = abundances
    g.vs["label"] = node_labels
    g.vs["color"] = node_colors
    g.vs["vertex_size"] = node_sizes

    return g, bbox


def main():

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