INNER CODE UNIT · Python
total
torognes/swarm · scripts/amplicon_contingency_table.py:77
total = sum(abundances)
abundances = [str(i) for i in abundances]
# Sanity check
if total == abundance:
print(amplicon, "\t".join(abundances), total, sep="\t",
file=sys.stdout)
else:
print("Abundance sum is not correct for this amplicon",
amplicon, abundance, total, file=sys.stderr)
sys.exit(-1)
return
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