INNER CODE UNIT · Python
align
TimoLassmann/kalign · python-kalign/__init__.py:237
def align(
sequences: List[str],
seq_type: Union[str, int] = "auto",
gap_open: Optional[float] = None,
gap_extend: Optional[float] = None,
terminal_gap_extend: Optional[float] = None,
n_threads: Optional[int] = None,
mode: Optional[str] = None,
fmt: Literal["plain", "biopython", "skbio"] = "plain",
ids: Optional[List[str]] = None,
) -> Union[List[str], Any]:
"""
Multiple sequence alignment via Kalign.
Parameters
----------
sequences : list of str
List of sequences to align.