INNER CODE UNIT · Python

run_tagtotag

timoast/sinto · sinto/cli.py:92

def run_tagtotag(options):
    tagtotag.tagtotag(
        bam=options.bam,
        from_tag=options.from_,
        to_tag=options.to,
        output=options.output,
        delete=options.delete,
        out_format=options.outputformat,
    )


@utils.log_info
def run_barcode(options):
    addbarcodes.addbarcodes(
        cb_position=options.bases,
        fq1=options.barcode_fastq,
        fq2=options.read1,
        fq3=options.read2,

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