INNER CODE UNIT · Python

run_tagtoname

timoast/sinto · sinto/cli.py:116

def run_tagtoname(options):
    tagtoname.move(
        bam=options.bam,
        output=options.output,
        cb_tag=options.tag,
        out_format=options.outputformat,
        from_tag=True
    )

@utils.log_info
def run_nametotag(options):
    tagtoname.move(
        bam=options.bam,
        output=options.output,
        cb_tag=options.tag,
        out_format=options.outputformat,
        from_tag=False,
        cb_regex=options.barcode_regex

View source record →