INNER CODE UNIT · Java

emboss_dir

sanger-pathogens/Artemis · install_dependencies.sh:38

emboss_dir=$(pwd)/EMBOSS-${EMBOSS_VERSION}
if [ ! -d $emboss_dir ]; then
  tar xzf emboss-${EMBOSS_VERSION}.tgz
fi
cd $emboss_dir
if [ -e "${emboss_dir}/build/bin/restrict" ]; then
  echo "Already built Emboss; skipping build"
else
  mkdir build
  ./configure --prefix ${emboss_dir}/build
  make
  make install
fi

export EMBOSS_ROOT=${emboss_dir}/build

cd $start_dir

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