INNER CODE UNIT · C++

prev_total_score

refresh-bio/FAMSA · src/msa_refinement.cpp:114

	score_t prev_total_score = profile_to_refine->CalculateTotalScore();

	sort(profile_to_refine->data.begin(), profile_to_refine->data.end(), [](CGappedSequence* p, CGappedSequence* q) {return p->id < q->id; });

	vector<size_t> dest_prof_id;
	vector<vector<size_t>> old_dest_prof_ids;

	vector<int> column_mapping1, column_mapping2;

	size_t i_ref;
	size_t i_succ_ref;
	bool valid_gap_stats = false;
#ifdef DEBUG_MODE
	int ref_upd[2] = { 0 };
	int hist_size[20] = { 0 };
#endif

	for (i_ref = i_succ_ref = 0; i_succ_ref < n_ref && i_ref < 20 * n_ref; ++i_ref)

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