INNER CODE UNIT · C++

n_seq

refresh-bio/FAMSA · src/msa_refinement.cpp:85

	size_t n_seq = profile_to_refine->Size();

	vector<size_t> gap_stats;

	if (n_ref > 2 * n_seq)
		n_ref = 2 * n_seq;
	if (n_ref > 0 && n_ref < 100 && n_seq < 100)
		n_ref = 100;

#ifdef DEBUG_MODE
	FILE* f_stat;

	if (output_file_name != "")
	{
		vector<CGappedSequence*> result;
		GetAlignment(result);

		COutputFile out_file;

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