INNER CODE UNIT · Python

OBBioMatchError

PDBeurope/arpeggio · arpeggio/core/exceptions.py:12

class OBBioMatchError(Exception):

    def __init__(self, serial=''):

        if not serial:
            logging.error('An OpenBabel atom could not be matched to a BioPython counterpart.')

        else:
            logging.error(f'OpenBabel OBAtom with serial number {serial} could not be matched to a BioPython counterpart.')


class AtomSerialError(Exception):

    def __init__(self):
        logging.error('One or more atom serial numbers are duplicated.')


class SiftMatchError(Exception):

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