INNER CODE UNIT · Python

__init__

PDBeurope/arpeggio · arpeggio/core/exceptions.py:8

    def __init__(self):
        logging.error('Please remove all hydrogens from the structure then re-run.')


class OBBioMatchError(Exception):

    def __init__(self, serial=''):

        if not serial:
            logging.error('An OpenBabel atom could not be matched to a BioPython counterpart.')

        else:
            logging.error(f'OpenBabel OBAtom with serial number {serial} could not be matched to a BioPython counterpart.')


class AtomSerialError(Exception):

    def __init__(self):

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