INNER CODE UNIT · Python

warned

nf-core/tools · nf_core/modules/lint/__init__.py:247

            warned = [LintResult(mod, *m) for m in (mod.warned + mod.failed)]
            if not self.fail_warned:
                self.warned += warned
            else:
                self.failed += warned

        # Otherwise run all the lint tests
        else:
            mod.get_inputs_from_main_nf()
            mod.get_outputs_from_main_nf()
            mod.get_topics_from_main_nf()
            # TODO container-conversion:  get_containers from main_nf

            # Update meta.yml file if requested
            if self.fix:
                self.update_meta_yml_file(mod)

            if self.repo_type == "pipeline" and self.modules_json and mod.repo_url:

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