INNER CODE UNIT · Python

run

moshi4/pyMSAviz · src/pymsaviz/scripts/cli.py:15

def run(
    infile: str | Path,
    outfile: str | Path,
    format: str = "fasta",
    color_scheme: str = "Zappo",
    start: int = 1,
    end: int | None = None,
    wrap_length: int | None = None,
    wrap_space_size: float = 3.0,
    label_type: str = "id",
    show_grid: bool = False,
    show_count: bool = False,
    show_consensus: bool = False,
    consensus_color: str = "#1f77b4",
    consensus_size: float = 2.0,
    sort: bool = False,
    dpi: int = 300,
):

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