INNER CODE UNIT · Python

get_args

moshi4/pyMSAviz · src/pymsaviz/scripts/cli.py:53

def get_args() -> argparse.Namespace:
    """Get arguments

    Returns
    -------
    args : argparse.Namespace
        Argument parameters
    """
    description = "MSA(Multiple Sequence Alignment) visualization CLI tool"
    parser = argparse.ArgumentParser(
        description=description,
        usage="pymsaviz [options] -i msa.fa -o msa_viz.png",
        add_help=False,
        epilog=f"Available Color Schemes:\n{MsaViz.available_color_schemes()}",
        formatter_class=argparse.RawDescriptionHelpFormatter,
    )

    parser.add_argument(

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