INNER CODE UNIT · Rust

unknown_output_extension_fails

mbhall88/rasusa · src/alignment/mod.rs:367

    fn unknown_output_extension_fails() {
        let input = Path::new("tests/cases/test.bam");
        let output = Path::new("tests/cases/result");

        let mut aln = Alignment {
            aln: input.to_path_buf(),
            output: Some(output.to_path_buf()),
            output_format: None,
            coverage: 2,
            seed: Some(2109),
            strategy: SubsamplingStrategy::Stream,
            swap_distance: 5,
            step_size: 100, // not used
            batch_size: 10_000,
            threads: NonZeroUsize::new(1).unwrap(),
        };
        assert!(aln.run().is_err());
    }

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