INNER CODE UNIT · Rust

run_aln_get_reads_result

mbhall88/rasusa · src/alignment/mod.rs:220

    fn run_aln_get_reads_result(
        input: &Path,
        seed: Option<u64>,
        strategy: SubsamplingStrategy,
    ) -> Vec<String> {
        run_aln_get_reads_result_with_threads(input, seed, strategy, NonZeroUsize::new(1).unwrap())
    }

    // as above, but with a configurable thread count - used to check that `--threads` doesn't
    // change which records get selected, only how the BAM is (de)compressed.
    fn run_aln_get_reads_result_with_threads(
        input: &Path,
        seed: Option<u64>,
        strategy: SubsamplingStrategy,
        threads: NonZeroUsize,
    ) -> Vec<String> {
        let target_depth = 3;
        let out = NamedTempFile::new().unwrap();

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