INNER CODE UNIT · Python

main

labgem/PPanGGOLiN · ppanggolin/main.py:220

def main():
    """
    Run the command given by user and set / check some things.

    :return:
    """
    args = cmd_line()

    if hasattr(args, "pangenome") and args.pangenome is not None:
        check_input_files(args.pangenome)

    if args.subcommand == "annotate":
        ppanggolin.annotate.launch(args)
    elif args.subcommand == "cluster":
        ppanggolin.cluster.launch(args)
    elif args.subcommand == "graph":
        ppanggolin.graph.launch(args)
    elif args.subcommand == "partition":

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