INNER CODE UNIT · Rust

load

informationsea/transanno · liftover-rs/src/chain/mod.rs:469

    pub fn load<R: Read>(chain_file: R) -> Result<ChainFile, LiftOverError> {
        let mut reader = BufReader::new(chain_file);
        let mut status = LiftOverReadStatus::Outside;
        let mut line = String::new();
        let mut line_num = 0;

        let mut chain_list = Vec::new();
        let mut current_chain: Option<Chain> = None;

        let mut original_chromosomes: Vec<Chromosome> = Vec::new();
        let mut new_chromosomes: Vec<Chromosome> = Vec::new();

        loop {
            line_num += 1;
            line.clear();
            let read_bytes = reader.read_line(&mut line)?;
            if read_bytes == 0 {
                // last line

View source record →