INNER CODE UNIT · Python

MyArgs

hahnlab/CAFE5 · scripts/batch_cfg_maker_inference.py:5

class MyArgs:
  def __init__(self, bin_path='./', input_file_path=None, tree_file_path=None, poisson_lambda=None, lambdas_list=[], alphas_list=[]):
      self.cafexp_path = bin_path
      self.input_args = 'i,t'
      self.input_values = input_file_path+','+tree_file_path
      self.options_args, self.options_values = '', ''
      self.output_args, self.output_values = 's', ''
      self.parameters_values, self.parameters_args = '', ''
      
      if poisson_lambda:
          self.parameters_args += 'p,'
          self.parameters_values = poisson_lambda+','
          self.output_values = 'p'+poisson_lambda

      self.parameters_args += 'l'

      # default values
      self.number_runs = 1

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