INNER CODE UNIT · Python

get_filepath

getzlab/rnaseqc · python/rnaseqc/__main__.py:6

def get_filepath(name):
    # return os.path.join(os.path.dirname(os.path.abspath(__file__)), name)
    return 'rnaseqc.{}'.format(name)

if __name__ == '__main__':
    parser = argparse.ArgumentParser('rnaseqc')

    subparsers = parser.add_subparsers(dest='command')

    commands = {
        'aggregate': get_filepath('aggregate'),
        'notebook': get_filepath('create_notebook'),
        'insert-size': get_filepath('insert_size_intervals'),
        'legacy-exons': get_filepath('legacy_exon_remap'),
        'report': get_filepath('report'),
        'run': get_filepath('run'),
    }

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