INNER CODE UNIT · Python

run_gapclosing

Gabaldonlab/redundans · redundans.py:373

def run_gapclosing(
    outdir,
    libraries,
    nogapsFname,
    scaffoldsFname,
    threads,
    limit,
    iters,
    resume,
    verbose,
    log,
    basename="_gapcloser",
    overlap=25,
    minReadLen=40,
):
    """Execute gapclosing step."""
    pout = scaffoldsFname
    stop = 1

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