INNER CODE UNIT · C

globalTid

dpryan79/MethylDackel · MBias.c:126

            globalTid = (uint32_t) -1;
        }
        if(localTid < hdr->n_targets && globalTid != (uint32_t) -1) {
            if(globalPos >= hdr->target_len[localTid]) {
                localEnd = hdr->target_len[localTid];
                globalTid++;
                globalPos = 0;
            }
        }
        pthread_mutex_unlock(&positionMutex);

        //If we have a BED file, then jump to the first overlapping region
        if(config->bed) {
            if(spanOverlapsBED(localTid, localPos, localEnd, config->bed, &bedIdx) != 1) continue;
        }

        //Break out of the loop if finished
        if(localTid >= hdr->n_targets) break; //Finish looping

View source record →