INNER CODE UNIT · C

lb

dpryan79/MethylDackel · common.c:144

        lb = bounds[4*strand+2];
        rb = bounds[4*strand+3];
    } else {
        lb = bounds[4*strand];
        rb = bounds[4*strand+1];
    }

    lb = (lb<b->core.l_qseq) ? lb : b->core.l_qseq;

    //trim on the left
    if(lb) {
        for(i=0; i<lb; i++) {
            qual[i] = 0;
            if(i&1) seq[i>>1] |= 0xf;
            else seq[i>>1] |= 0xf0;
        }
    }

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