INNER CODE UNIT · Python

chromosome

deeptools/HiCExplorer · hicexplorer/chicAggregateStatistic.py:91

        chromosome = [chromosome] * len(start_list)

        target_regions = list(zip(chromosome, start_list, end_list))
        if len(target_regions) == 0:
            return accepted_scores

        hicmatrix = hm.hiCMatrix()
        target_regions_intervaltree = hicmatrix.intervalListToIntervalTree(target_regions)[0]

    for key in pScoresDictionary:
        chromosome = pScoresDictionary[key][0]
        start = int(pScoresDictionary[key][1])
        end = int(pScoresDictionary[key][2])
        if chromosome in target_regions_intervaltree:
            target_interval = target_regions_intervaltree[chromosome][start:end]
        else:
            continue
        if target_interval:

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