INNER CODE UNIT · Python

final_dest

BortonWrightonLabs/DRAM · bin/format_kegg_database.py:45

        final_dest = output_dir / path.basename(v)
        if v != final_dest:
            for db_file in glob("%s*" % v):
                move(db_file, path.join(output_dir, path.basename(db_file)))
            v = path.join(output_dir, path.basename(v))
        # update_dram_forms the settings per OUTPUT fill, including the process_settings
        #  and database_settings, which are per input file.
        LOGGER.info(f"Moved {k} to final destination")


def process_kegg(
    kegg_loc,
    output_dir,
    gene_ko_link_loc=None,
    download_date=None,
    threads=10,
):
    threads = threads or 10  # make sure cli option is >=1 and not None

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