INNER CODE UNIT · C

min

aquaskyline/SOAPdenovo2 · fusion/attachPEinfo.c:452

                      min = tmp->PE[ii];
                      minid = ii;
                    }
                }

              int sum = 0;

              for(ii = 0; ii < weight; ii++)
                {
                  if(ii != maxid && ii != minid)
                    {
                      sum += tmp->PE[ii];
                    }
                }

              ignorePE4 += 2;
              tmp->gapLen = sum / (weight - 2);
              fprintf(stderr, "estimating contigs' gap by removing max&min PE ,with max&min %d %d\n",

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